BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B08SP1|AL427439
(926 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1509 1761 0.0
>3x_Contig1509
Length = 8584
Score = 1761 bits (878), Expect = 0.0
Identities = 906/926 (97%)
Strand = Plus / Plus
Query: 1 atcctaccttcaaatcgaaacctaatgamacccatttgtggtatatttyactgtttaaga 60
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 1205 atcctaccttcaaatcgaaacctaatgaaacccatttgtggtatattttactgtttaaga 1264
Query: 61 gttaacttcatatcgtgacagamttgaccgggtcgtacatgtatgatgaattgtaaacat 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1265 gttaacttcatatcgtgacagaattgaccgggtcgtacatgtatgatgaattgtaaacat 1324
Query: 121 gaatgatttcctacaggmctattcattgaagactccgctgttttcagttatctatgaata 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 gaatgatttcctacaggactattcattgaagactccgctgttttcagttatctatgaata 1384
Query: 181 gtttcactaacaaamattttgctcccttattattacyaggaatttttcaaccatcaagtc 240
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1385 gtttcactaacaaaaattttgctcccttattattactaggaatttttcaaccatcaagtc 1444
Query: 241 ggtggtgtccaammagctttgttgagttacaacgaaaggggtaactccactggtatggcc 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1445 ggtggtgtccaaaaagctttgttgagttacaacgaaaggggtaactccactggtatggcc 1504
Query: 301 actattacctttmagaacgcagaacaagctaacttagctgtcaagamattccacaacgca 360
|||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 1505 actattacctttaagaacgcagaacaagctaacttagctgtaaagaaattccacaacgca 1564
Query: 361 ccaattgatggtggtaaatccaaattgagattgacgttgattgtcgatccaagcagaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 ccaattgatggtggtaaatccaaattgagattgacgttgattgtcgatccaagcagaaag 1624
Query: 421 acattattggacagamtccgccctgtacagaatgctcaggctgccgcgccaaacaagaag 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 acattattggacagaatccgccctgtacagaatgctcaggctgccgcgccaaacaagaag 1684
Query: 481 gcagctccaacaaagcctcaacctaagamgamaccagccggtccaaacaagamagccatt 540
|||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct: 1685 gcagctccaacaaagcctcaacctaagaagaaaccagccggtccaaacaagaaagccatt 1744
Query: 541 gctgctaagcaaaagacaagagctaagccagacaagamgtctttggcagacttagacaag 600
|||||||||||||||| ||||||||||||||| |||| |||||||| |||||||||||||
Sbjct: 1745 gctgctaagcaaaagaaaagagctaagccagaaaagaagtctttggaagacttagacaag 1804
Query: 601 gaaatggctgactattttgaagaatccaaataagatattgcgttcttgaaattactggac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 gaaatggctgactattttgaagaatccaaataagatattgcgttcttgaaattactggac 1864
Query: 661 tgagaaattataaagtcttccttaataacgaacggattgtctctgctttcgaatctattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 tgagaaattataaagtcttccttaataacgaacggattgtctctgctttcgaatctattc 1924
Query: 721 gttagacatcctagaagttcagttcatttgttgtttgttttatattcctcaatttcaacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1925 gttagacatcctagaagttcagttcatttgttgtttgttttatattcctcaatttcaacc 1984
Query: 781 ggtgtgactgcgtggtttctcaatcaaaaaaatccgtatctttcttatgtgctcggccta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 ggtgtgactgcgtggtttctcaatcaaaaaaatccgtatctttcttatgtgctcggccta 2044
Query: 841 tcttttcttacctagctaaactttattataatattgatatcaatagtttgtattttattt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 tcttttcttacctagctaaactttattataatattgatatcaatagtttgtattttattt 2104
Query: 901 cactttctttwagcactatttacatg 926
|||||||||| |||||||||||||||
Sbjct: 2105 cactttctttaagcactatttacatg 2130
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6522
Number of Sequences: 1807
Number of extensions: 6522
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)